STRINGSTRING
Zm.27476 protein (Zea mays) - STRING interaction network
"Zm.27476" - mTERF family protein in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.27476mTERF family protein (494 aa)    
Predicted Functional Partners:
GRMZM2G035042_P01
IMP dehydrogenase/GMP reductase (668 aa)
     
   
  0.734
mTRF8
Hypothetical protein LOC100193811 (394 aa)
           
  0.712
MubC5
Polyubiquitin (535 aa)
         
  0.554
pco110026
Polyubiquitin containing 7 ubiquitin monomers (381 aa)
         
  0.554
CFM3
CRM family member 3 ; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on subgroup IIB introns. The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM3 and CAF1 or CAF2 (PubMed-18799595). May influence the biogenesis of the mitochondrial small ribosomal subunit (By similarity) (1523 aa)
     
   
  0.553
GRMZM2G319109_P01
Uncharacterized LOC103630315 (794 aa)
     
 
  0.544
GRMZM2G335419_P01
LOC100280691 (398 aa)
           
  0.521
Zm.83711
Clathrin assembly protein (LOC100284872), mRNA (388 aa)
           
  0.521
WHY1
LOC100170235 ; Single-stranded DNA and RNA binding protein that maintains plastid genome stability by preventing break-induced and short homology-dependent illegitimate recombinations. Functions in RNA metabolism and is involved in the maturation of the atpF and 23S ribosomal RNAs (266 aa)
     
   
  0.497
cl44044_1b
LOC100284044 (546 aa)
           
  0.480
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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