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STRINGSTRING
algt1 protein (Zea mays) - STRING interaction network
"algt1" - Alanine--glyoxylate aminotransferase1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
algt1Alanine--glyoxylate aminotransferase1 (508 aa)    
Predicted Functional Partners:
541946
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine (1097 aa)
   
 
  0.931
bas1
Beta alanine synthase1; Beta-ureidopropionase; Uncharacterized protein (343 aa)
   
 
  0.924
pco061337
Methylmalonate-semialdehyde dehydrogenase [acylating] mitochondrial (400 aa)
 
 
 
  0.921
100283587
3-hydroxyisobutyrate dehydrogenase ; Belongs to the 3-hydroxyisobutyrate dehydrogenase family (342 aa)
         
  0.917
gsh1
Putative gamma-glutamylcysteine synthetase (503 aa)
         
    0.900
100381846
Glutamate--cysteine ligase chloroplastic (500 aa)
         
    0.900
GRMZM2G359559_P01
annotation not available (262 aa)
   
 
  0.897
pco084394
Serine--glyoxylate aminotransferase; Uncharacterized protein (403 aa)
   
 
  0.897
GRMZM2G119511_P01
annotation not available (159 aa)
   
 
  0.897
GRMZM2G050481_P01
annotation not available (290 aa)
   
 
  0.897
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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