STRINGSTRING
csu173 protein (Zea mays) - STRING interaction network
"csu173" - Hypothetical protein LOC100273241 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csu173Hypothetical protein LOC100273241 (249 aa)    
Predicted Functional Partners:
cl11315_1a
Hypothetical protein LOC100278360 (154 aa)
     
 
  0.778
NBP
Nucleic acid binding protein1 (303 aa)
     
        0.741
IDP1986
Hypothetical protein LOC100191656 (171 aa)
     
        0.706
IDP813
Hypothetical protein LOC100192010 (232 aa)
     
        0.680
pco116928b
LOC100282000 (130 aa)
     
        0.657
RPS17
30S ribosomal protein S17, chloroplastic Precursor ; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (132 aa)
     
        0.646
GRMZM2G108643_P01
Hypothetical protein LOC100274150 (209 aa)
     
        0.566
pco095664
Hypothetical protein LOC100279441 (335 aa)
     
        0.558
GRMZM2G043500_P01
Hypothetical protein LOC100278883 (171 aa)
     
   
  0.547
GRMZM2G110294_P01
Hypothetical protein LOC100275314 (125 aa)
     
        0.525
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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