STRINGSTRING
Zm.126369 protein (Zea mays) - STRING interaction network
"Zm.126369" - Probable ubiquitin conjugation factor E4 in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.126369Probable ubiquitin conjugation factor E4 (1031 aa)    
Predicted Functional Partners:
Zm.25284
Putative hect E3 ubiquitin ligase Fragment (1759 aa)
     
  0.982
Zm.26063
E3 ubiquitin-protein ligase UPL4 (1210 aa)
     
  0.982
GRMZM2G124297_P01
E3 ubiquitin-protein ligase UPL4-like (998 aa)
     
  0.982
Zm.84476
E3 ubiquitin-protein ligase UPL3-like (1877 aa)
     
  0.982
GRMZM2G049198_P01
Annotation not available (290 aa)
     
 
  0.967
GRMZM2G386560_P01
Annotation not available (64 aa)
     
  0.957
GRMZM2G170843_P02
Ubiquilin-1 (576 aa)
     
 
  0.951
GRMZM2G136769_P01
Hypothetical protein LOC100382017 (578 aa)
     
 
  0.951
GRMZM2G057158_P01
Hypothetical protein LOC100383383 (536 aa)
     
 
  0.951
GRMZM2G479088_P01
Annotation not available (72 aa)
     
 
  0.950
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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