STRINGSTRING
GRMZM2G030873_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G030873_P01" - DEAD-box ATP-dependent RNA helicase 1 in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G030873_P01DEAD-box ATP-dependent RNA helicase 1 (523 aa)    
Predicted Functional Partners:
GRMZM2G060817_P02
Hypothetical protein LOC100191510 (885 aa)
     
        0.986
Zm.15935
Hypothetical protein LOC100192696 ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (434 aa)
     
   
  0.982
Zm.36135
Uncharacterized LOC103627634 (530 aa)
     
   
  0.978
Zm.27527
Uncharacterized LOC103648038 (825 aa)
     
   
  0.978
GRMZM2G056142_P01
Annotation not available (251 aa)
     
   
  0.978
AC212564.2_FGP001
Annotation not available (83 aa)
     
   
  0.978
GRMZM5G811567_P01
Uncharacterized protein (414 aa)
   
   
0.975
GRMZM2G083580_P02
Hypothetical protein LOC100383059 (541 aa)
   
   
0.974
pco063852
Hypothetical protein LOC100273968 (634 aa)
   
 
0.971
Zm.17763
Uncharacterized protein (939 aa)
     
        0.968
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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