STRINGSTRING
Zm.18456 protein (Zea mays) - STRING interaction network
"Zm.18456" - Calmodulin binding protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.18456Calmodulin binding protein (396 aa)    
Predicted Functional Partners:
GRMZM2G127695_P01
Hypothetical protein LOC100272690 (238 aa)
     
        0.743
Zm.163130
Uncharacterized protein (351 aa)
           
  0.543
Zm.24275
Uncharacterized protein (351 aa)
           
  0.543
GRMZM2G078178_P02
Hypothetical protein LOC100383305 (501 aa)
           
  0.543
GRMZM2G162276_P01
Hypothetical protein LOC100273254 (133 aa)
     
        0.469
ZmGR1b
GR1a protein (133 aa)
     
        0.449
expB4
Beta-expansin 4 (308 aa)
     
        0.437
Zm.25835
Myosin-11-like (1410 aa)
           
  0.424
Zm.107636
Early endosome antigen 1-like (1566 aa)
           
  0.424
Zm.21776
Golgin subfamily A member 4-like (2160 aa)
           
  0.424
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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