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Zm.136970 protein (Zea mays) - STRING interaction network
"Zm.136970" - LOC100282309 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.136970LOC100282309 (295 aa)    
Predicted Functional Partners:
Zm.95519
pre-mRNA-processing factor 17-like (572 aa)
       
      0.895
Zm.1204
pre-mRNA-splicing factor PRP17 (572 aa)
       
      0.895
RAB15
Glycine-rich RNA-binding, abscisic acid-inducible protein ; Possibly has a role in RNA transcription or processing during stress (159 aa)
   
      0.649
GRMZM2G077797_P01
RNA binding protein (166 aa)
   
 
      0.601
pco077498
Hypothetical protein LOC100382959 (103 aa)
   
 
      0.595
Zm.21062
Glycine-rich RNA-binding protein 2 (135 aa)
   
 
      0.591
GRMZM5G841101_P01
Hypothetical protein LOC100217196 (287 aa)
   
 
      0.589
GRMZM2G163297_P01
ELAV-like protein 4 (129 aa)
   
 
      0.583
Zm.76158
Ribonucleoprotein A (268 aa)
   
 
      0.583
GRMZM2G143870_P02
Plastid-specific 30S ribosomal protein 2 (251 aa)
   
 
      0.567
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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