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cl19897_1 protein (Zea mays) - STRING interaction network
"cl19897_1" - Hypothetical protein LOC100194408 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl19897_1Hypothetical protein LOC100194408 (935 aa)    
Predicted Functional Partners:
GRMZM5G854199_P01
Uncharacterized protein (405 aa)
     
  0.981
GRMZM5G841900_P03
3-5 exoribonuclease CSL4 (199 aa)
       
  0.979
GRMZM5G802854_P01
Exosome complex exonuclease RRP40 (239 aa)
     
  0.979
GRMZM2G173989_P01
Exosome complex exonuclease RRP40 (239 aa)
     
  0.979
rph1
RNase PH homolog (242 aa)
     
  0.979
GRMZM2G150496_P01
Putative uncharacterized protein (526 aa)
     
  0.977
GRMZM2G009413_P01
Hypothetical protein LOC100216860 (319 aa)
     
  0.977
GRMZM2G086401_P01
Uncharacterized protein (421 aa)
     
  0.975
Zm.96156
Hypothetical protein LOC100280422 (LOC100280422), mRNA (287 aa)
     
  0.974
GRMZM2G091595_P01
Putative uncharacterized protein (287 aa)
     
  0.974
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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