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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
umc1128 protein (Zea mays) - STRING interaction network
"umc1128" - annotation not available in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc1128annotation not available (627 aa)    
Predicted Functional Partners:
umc1144
MYB-transcription factor 156 (331 aa)
           
  0.741
BA1
Transcription factor bHLH83; Barren stalk1; Uncharacterized protein (219 aa)
           
  0.560
100279630
MADS-box transcription factor 56 (228 aa)
       
 
  0.519
100193857
Transmembrane amino acid transporter family protein (464 aa)
           
  0.487
GRMZM2G025860_P01
ABC transporter B family member 15 (1231 aa)
           
  0.487
100191944
ABC transporter B family member 2 (1262 aa)
           
  0.487
ZIM28
ZIM-transcription factor 28 (218 aa)
           
  0.480
IDP407
Guanine nucleotide-binding protein alpha-1 subunit; Uncharacterized protein (390 aa)
           
  0.480
100279221
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein (813 aa)
     
 
  0.451
mads65
annotation not available (389 aa)
       
 
  0.417
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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