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STRINGSTRING
pco075454 protein (Zea mays) - STRING interaction network
"pco075454" - Nucleic acid binding protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco075454Nucleic acid binding protein (365 aa)    
Predicted Functional Partners:
100283400
Developmentally-regulated GTP-binding protein 1 (368 aa)
     
 
  0.998
GRMZM2G061812_P01
annotation not available (334 aa)
     
 
  0.997
GRMZM2G165939_P01
Developmentally-regulated GTP-binding protein 2 (245 aa)
     
 
  0.981
100191629
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (448 aa)
     
      0.967
GRMZM2G388892_P01
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1162 aa)
     
      0.953
pco061701
Uncharacterized protein (461 aa)
     
   
  0.875
GRMZM2G087944_P01
annotation not available (725 aa)
     
 
  0.868
GRMZM2G113750_P02
Pectin acetylesterase; Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties (436 aa)
     
 
  0.867
pco073635
Eukaryotic translation initiation factor 2 (eIF-2) family protein (1293 aa)
     
 
  0.867
pco081085
Periodic tryptophan protein 1 (496 aa)
     
        0.867
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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