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Zm.139028 protein (Zea mays) - STRING interaction network
"Zm.139028" - ABC transporter B family member 25, mitochondrial in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.139028ABC transporter B family member 25, mitochondrial (454 aa)    
Predicted Functional Partners:
GRMZM2G117676_P01
Annotation not available (91 aa)
 
 
 
  0.717
GRMZM2G587327_P01
Hypothetical protein LOC100382060 (741 aa)
       
 
  0.690
GRMZM2G473704_P01
Annotation not available (155 aa)
       
 
  0.690
Zm.118444
Hypothetical protein LOC100193565 (603 aa)
       
 
  0.690
GRMZM2G338693_P01
Annotation not available (102 aa)
     
 
  0.649
Zm.24151
Cytosolic Fe-S cluster assembly factor NUBP1 homolog (382 aa)
     
 
  0.649
GRMZM2G117517_P01
Nucleotide-binding protein-like (180 aa)
     
 
  0.649
Zm.79823
Nucleotide-binding protein-like (298 aa)
     
 
  0.649
GRMZM2G097190_P01
Nucleotide-binding protein 1 ; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. Functions as Fe-S scaffold, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins. Essential for embryo development (348 aa)
     
 
  0.649
nbp35
Nucleotide-binding protein 1 ; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. Functions as Fe-S scaffold, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins. Essential for embryo development (348 aa)
     
 
  0.649
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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