STRINGSTRING
cl66163_1 protein (Zea mays) - STRING interaction network
"cl66163_1" - LOC100280975 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl66163_1LOC100280975 (201 aa)    
Predicted Functional Partners:
GRMZM2G180990_P02
Ligatin (211 aa)
     
 
  0.981
pco078161
Hypothetical protein LOC100193869 (339 aa)
     
  0.926
GRMZM2G058138_P01
Hypothetical protein LOC100279728 (339 aa)
     
  0.926
GRMZM2G080048_P01
Eukaryotic translation initiation factor 2 beta subunitPutative uncharacterized protein ; (267 aa)
     
  0.915
Zm.10061
Eukaryotic translation initiation factor 2 beta subunit (272 aa)
     
  0.915
pco083605
Hypothetical protein LOC100193916 (267 aa)
     
  0.915
GRMZM2G027513_P01
Annotation not available (64 aa)
     
  0.915
AC185468.3_FGP003
Annotation not available (80 aa)
     
  0.915
GRMZM2G117900_P01
Hypothetical protein LOC100383287 (464 aa)
     
  0.911
GRMZM2G107654_P01
Hypothetical protein LOC100217157 (483 aa)
     
  0.911
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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