STRINGSTRING
Zm.5259 protein (Zea mays) - STRING interaction network
"Zm.5259" - Putative HLH DNA-binding domain superfamily protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.5259Putative HLH DNA-binding domain superfamily protein (518 aa)    
Predicted Functional Partners:
GRMZM2G416426_P01
Putative uncharacterized protein adh1D (580 aa)
       
 
  0.816
Zm.17458
E3 ubiquitin-protein ligase HOS1-like (925 aa)
       
 
  0.816
Zm.12852
Uncharacterized protein (624 aa)
     
      0.667
Zm.13866
Myb-related protein Myb4 (260 aa)
       
 
  0.606
MYB41
R2R3MYB-domain protein Fragment (244 aa)
       
 
  0.606
Zm.98633
R2R3MYB-domain protein Fragment (294 aa)
       
 
  0.606
myb132
Hypothetical protein LOC100272967 (277 aa)
       
 
  0.606
phd17
Hypothetical protein LOC100272532 (876 aa)
       
 
  0.584
GRMZM2G406643_P01
Ubiquitin-like (141 aa)
       
      0.538
Zm.124974
UBiQuitin family member (143 aa)
       
      0.538
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (20%) [ZH]