STRINGSTRING
Zm.80440 protein (Zea mays) - STRING interaction network
"Zm.80440" - Myosin XI Fragment in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.80440Myosin XI Fragment (1046 aa)    
Predicted Functional Partners:
GRMZM2G478779_P01
Actin-1 (275 aa)
       
  0.917
GRMZM2G473906_P04
Hypothetical protein LOC100216670 (215 aa)
     
  0.850
GRMZM2G154960_P01
LOC100280532 (345 aa)
     
  0.850
umc1496
Hypothetical protein LOC100191168 (215 aa)
     
  0.850
GRMZM2G101938_P01
Hypothetical protein LOC100194331 (217 aa)
     
  0.850
GRMZM2G029486_P01
Hypothetical protein LOC100193335 (223 aa)
     
  0.850
GRMZM2G457125_P01
Ras-related protein RABA3-like (224 aa)
       
  0.850
GRMZM2G443121_P01
Uncharacterized protein (105 aa)
       
  0.850
GRMZM2G420935_P01
Uncharacterized protein (128 aa)
       
  0.850
GRMZM2G405761_P01
Annotation not available (65 aa)
       
  0.850
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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