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STRINGSTRING
gpm105 protein (Zea mays) - STRING interaction network
"gpm105" - Shikimate O-hydroxycinnamoyltransferase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm105Shikimate O-hydroxycinnamoyltransferase (446 aa)    
Predicted Functional Partners:
103653944
Putative AMP-dependent synthetase and ligase superfamily protein (575 aa)
         
  0.895
100272756
Trans-cinnamate 4-monooxygenase; Putative cytochrome P450 superfamily protein; Uncharacterized protein (502 aa)
     
 
  0.889
100272801
Trans-cinnamate 4-monooxygenase; Putative cytochrome P450 superfamily protein; Uncharacterized protein (501 aa)
     
 
  0.889
GRMZM2G055320_P01
Putative AMP-dependent synthetase and ligase superfamily protein (639 aa)
     
 
  0.884
gpm99a
Caffeoyl-CoA O-methyltransferase 1; Methylates caffeoyl-CoA to feruloyl-CoA and 5- hydroxyferuloyl-CoA to sinapoyl-CoA. Plays a role in the synthesis of feruloylated polysaccharides. Involved in the reinforcement of the plant cell wall. Also involved in the responding to wounding or pathogen challenge by the increased formation of cell wall- bound ferulic acid polymers; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-dependent O- methyltransferase family. CCoAMT subfamily (258 aa)
     
 
  0.880
cncr1
Cinnamoyl CoA reductase1 (371 aa)
     
  0.861
GRMZM2G010468_P01
Putative cytochrome P450 superfamily protein (505 aa)
     
 
  0.852
GRMZM2G510303_P01
annotation not available (851 aa)
     
 
  0.847
100274274
Putative cytochrome P450 superfamily protein; Uncharacterized protein (512 aa)
     
 
  0.847
542166
4-coumarate--CoA ligase 1 (555 aa)
     
 
  0.846
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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