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cl5992_1b protein (Zea mays) - STRING interaction network
"cl5992_1b" - Hypothetical protein LOC100191480 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl5992_1bHypothetical protein LOC100191480 (474 aa)    
Predicted Functional Partners:
GRMZM2G012611_P01
Hypothetical protein LOC100272425 (564 aa)
     
   
  0.548
Zm.23400
Nuclear autoantigenic sperm protein (871 aa)
           
  0.528
GRMZM2G167868_P01
Translocation protein SEC63 homolog (345 aa)
           
  0.430
GRMZM2G007871_P01
Uncharacterized protein (513 aa)
           
  0.430
GRMZM2G435294_P01
Myosin-11-like (1529 aa)
           
  0.426
Zm.442
Myosin1 (1529 aa)
           
  0.426
GRMZM2G162443_P01
Early endosome antigen 1-like (963 aa)
           
  0.410
Zm.25260
Protein IWS1 homolog (1115 aa)
           
  0.410
gpm913a
Hypothetical protein LOC100280374 (667 aa)
           
  0.410
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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