STRINGSTRING
Zm.85089 protein (Zea mays) - STRING interaction network
"Zm.85089" - Beta-galactosidase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.85089Beta-galactosidase (844 aa)    
Predicted Functional Partners:
Zm.10287
Probable methionine--tRNA ligase, mitochondrial (599 aa)
       
      0.894
Zm.142011
Lysosomal alpha-mannosidase-like (682 aa)
           
  0.720
GRMZM2G336678_P01
Alpha-mannosidase (752 aa)
           
  0.720
GRMZM2G334409_P01
Alpha-mannosidase 2-like (1179 aa)
           
  0.713
GRMZM2G075470_P02
Putative uncharacterized protein (1183 aa)
           
  0.713
Zm.2572
Uncharacterized protein (802 aa)
       
      0.647
Zm.151704
Probable methionine--tRNA ligase (802 aa)
       
      0.647
Zm.20172
Probable methionine--tRNA ligase (801 aa)
       
      0.647
Zm.27419
alpha-L-fucosidase 2 (727 aa)
         
  0.605
Zm.13425
Putative uncharacterized protein (1036 aa)
           
  0.580
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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