STRINGSTRING
GRMZM2G039996_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G039996_P01" - Chlorophyll a-b binding protein CP24 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G039996_P01Chlorophyll a-b binding protein CP24 (253 aa)    
Predicted Functional Partners:
psa6
Photosystem I reaction center6 (134 aa)
     
   
  0.885
pco077228
Geranylgeranyl hydrogenase (457 aa)
     
   
  0.844
GRMZM2G092311_P02
Chlorophyll a-b binding protein 6A (273 aa)
     
   
0.826
GRMZM2G036880_P01
Chlorophyll a-b binding protein 6A (249 aa)
     
   
0.825
GRMZM2G085646_P01
Photosystem I reaction center subunit III, chloroplastic-like (232 aa)
     
   
  0.815
Zm.67341
Photosystem I reaction center subunit III (225 aa)
     
   
  0.815
Zm.78120
Photosystem I reaction center subunit XI (212 aa)
     
   
  0.811
GRMZM2G160268_P02
Chlorophyll a-b binding protein 4 (244 aa)
     
   
0.799
gpm571
LOC100284001 (247 aa)
     
   
0.797
GRMZM2G057281_P01
Chlorophyll a-b binding protein of LHCII type III (269 aa)
     
   
0.790
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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