STRINGSTRING
PIN5c protein (Zea mays) - STRING interaction network
"PIN5c" - Hypothetical protein LOC100273056 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIN5cHypothetical protein LOC100273056 ; May act as a component of the auxin efflux carrier (365 aa)    
Predicted Functional Partners:
Zm.156043
PHD finger protein ALFIN-LIKE 5 (256 aa)
           
  0.721
GRMZM2G125424_P04
Hypothetical protein LOC100383541 (1264 aa)
           
  0.721
br2
Hypothetical protein LOC100384057 (1379 aa)
           
  0.523
GRMZM2G072850_P01
ABC transporter B family member 19-like (1266 aa)
           
  0.465
Zm.2959
ABC transporter B family member 19-like (1266 aa)
           
  0.463
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (21%) [ZH]