STRINGSTRING
Zm.2109 protein (Zea mays) - STRING interaction network
"Zm.2109" - Superkiller viralicidic activity 2-like 2 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.2109Superkiller viralicidic activity 2-like 2 (1004 aa)    
Predicted Functional Partners:
rph1
RNase PH homolog (242 aa)
     
  0.978
Zm.20791
Uncharacterized LOC103633224 (960 aa)
     
  0.977
pza00381
Hypothetical protein LOC100383056 (901 aa)
     
  0.977
GRMZM2G452875_P01
Annotation not available (247 aa)
     
  0.976
GRMZM2G159860_P01
Annotation not available (302 aa)
     
  0.976
GRMZM2G148959_P01
Annotation not available (266 aa)
     
  0.976
GRMZM2G145704_P02
Annotation not available (341 aa)
     
  0.976
GRMZM2G039096_P01
Annotation not available (244 aa)
     
  0.976
GRMZM2G009642_P01
Annotation not available (703 aa)
     
  0.976
GRMZM2G000749_P01
Hypothetical protein LOC100384536 (666 aa)
     
  0.976
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (14%) [HD]