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Zm.13238 protein (Zea mays) - STRING interaction network
"Zm.13238" - Probable serine/threonine-protein kinase cdc7 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.13238Probable serine/threonine-protein kinase cdc7 (983 aa)    
Predicted Functional Partners:
GRMZM2G139894_P01
Putative uncharacterized protein (957 aa)
     
  0.994
GRMZM2G450055_P01
Hypothetical protein LOC100304310 (729 aa)
     
  0.991
GRMZM2G066101_P01
DNA replication licensing factor mcm4 (850 aa)
     
  0.990
GRMZM2G327032_P01
Hypothetical protein LOC100383139 (851 aa)
     
  0.988
Zm.6791
Probable DNA helicase MCM9 (480 aa)
     
  0.988
GRMZM2G075978_P01
Hypothetical protein LOC100216891 (729 aa)
     
  0.986
MCM7
Replication licensing factor MCM7 homologue (720 aa)
     
  0.986
MCM6
Minichromosome maintenance protein (831 aa)
     
  0.986
Zm.59370
Origin recognition complex1 (852 aa)
     
  0.986
PHD16
Hypothetical protein LOC100280350 (LOC100280350), mRNA (808 aa)
     
  0.986
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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