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STRINGSTRING
LOC542202 protein (Zea mays) - STRING interaction network
"LOC542202" - Senescence-associated protein DH in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC542202Senescence-associated protein DH; Uncharacterized protein ; Belongs to the tetraspanin (TM4SF) family (273 aa)    
Predicted Functional Partners:
103627911
annotation not available (1101 aa)
           
  0.657
103640507
annotation not available (871 aa)
     
   
  0.609
100272591
Putative disease resistance protein (858 aa)
     
   
  0.609
100281151
Ap2/EREBP transcription factor (212 aa)
           
  0.583
ERF1
Ethylene-responsive factor-like protein 1; Putative AP2/EREBP transcription factor superfamily protein (230 aa)
           
  0.489
gpm305
Hexose transporter ; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family (747 aa)
           
  0.483
nad2
annotation not available (197 aa)
           
  0.480
GRMZM2G362883_P02
annotation not available (457 aa)
           
  0.474
103635072
Pectinesterase inhibitor (195 aa)
           
  0.472
100285137
Rab geranylgeranyl transferase like protein (693 aa)
           
  0.457
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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