STRINGSTRING
Zm.11828 protein (Zea mays) - STRING interaction network
"Zm.11828" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.11828Uncharacterized protein (514 aa)    
Predicted Functional Partners:
GRMZM2G020073_P01
Uncharacterized protein (671 aa)
       
 
  0.938
GRMZM2G466265_P01
Probable ubiquitin-conjugating enzyme E2 25 (382 aa)
     
  0.914
GRMZM5G891195_P01
Annotation not available (99 aa)
     
  0.914
GRMZM2G703639_P01
Annotation not available (139 aa)
     
  0.914
GRMZM2G330731_P01
Uncharacterized protein (495 aa)
     
  0.914
GRMZM2G081423_P01
Annotation not available (99 aa)
     
  0.914
AC214743.3_FGP002
Uncharacterized protein (261 aa)
     
  0.914
GRMZM2G367411_P01
Uncharacterized protein (299 aa)
   
0.875
GRMZM2G344388_P01
Hypothetical protein LOC100272290 (401 aa)
   
0.874
GRMZM2G049691_P01
Uncharacterized protein (319 aa)
   
0.872
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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