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STRINGSTRING
GRMZM2G041878_P02 protein (Zea mays) - STRING interaction network
"GRMZM2G041878_P02" - AUGMIN subunit 6 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G041878_P02AUGMIN subunit 6 (785 aa)    
Predicted Functional Partners:
100277574
AUGMIN subunit 1 (310 aa)
           
  0.957
GRMZM2G068277_P01
AUGMIN subunit 4 (353 aa)
           
  0.957
100191214
AUGMIN subunit 2 (264 aa)
           
  0.951
cl30708_1
Nuclear matrix protein 1 (328 aa)
           
  0.926
100501140
AUGMIN subunit 5 (787 aa)
           
  0.841
GRMZM2G055917_P02
AUGMIN subunit 5 (787 aa)
           
  0.841
GRMZM2G154892_P01
AUGMIN subunit 3 (617 aa)
           
  0.776
103632036
annotation not available (172 aa)
           
  0.776
AC204563.3_FGP011
annotation not available (147 aa)
           
  0.776
ufg15
Putative DUF566 domain containing family protein (483 aa)
           
  0.713
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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