STRINGSTRING
pco106379 protein (Zea mays) - STRING interaction network
"pco106379" - LOC100283778 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco106379LOC100283778 (156 aa)    
Predicted Functional Partners:
Zm.83356
LOC100282036 (216 aa)
   
          0.521
GRMZM2G152111_P06
Transformer-2 protein (283 aa)
   
          0.515
c3h30
RNA-binding motif protein, X-linked 2 (298 aa)
   
          0.506
GRMZM2G070259_P01
RNA binding protein (257 aa)
   
 
  0.500
Zm.136970
LOC100282309 (295 aa)
   
          0.500
Zm.10852
Branched-chain-amino-acid aminotransferase (405 aa)
           
  0.459
GRMZM2G108919_P01
Polyadenylate-binding protein 2 (212 aa)
   
          0.457
GRMZM2G009448_P01
Glycine-rich RNA-binding protein 7 (261 aa)
   
 
0.443
FIP1
Putative uncharacterized protein (262 aa)
           
  0.420
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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