STRINGSTRING
GRMZM2G042136_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G042136_P01" - Flavoprotein wrbA in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G042136_P01Flavoprotein wrbA (248 aa)    
Predicted Functional Partners:
pco134240b
LOC100284051 (394 aa)
   
   
  0.771
GRMZM2G030203_P01
50S ribosomal protein L10 (222 aa)
           
  0.721
Zm.47551
USP family protein (261 aa)
           
  0.718
pco077228
Geranylgeranyl hydrogenase (457 aa)
         
  0.711
GRMZM2G479068_P01
Uncharacterized protein (419 aa)
     
        0.572
GRMZM2G411177_P01
Putative alcohol dehydrogenase superfamily protein (342 aa)
     
        0.572
GRMZM2G368058_P01
Uncharacterized protein (175 aa)
     
        0.572
Zm.3560
NADP-dependent oxidoreductase P1 (358 aa)
     
        0.572
GRMZM2G147191_P02
Hypothetical protein LOC100381485 (634 aa)
     
        0.572
Zm.101407
Hypothetical protein LOC100278320 (354 aa)
     
        0.572
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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