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STRINGSTRING
GRMZM2G042208_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G042208_P01" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G042208_P01Uncharacterized protein (226 aa)    
Predicted Functional Partners:
GRMZM2G310465_P01
annotation not available (514 aa)
     
 
  0.975
gpm624
Spliceosome RNA helicase BAT1 isoform 1; Spliceosome RNA helicase BAT1 isoform 2; Spliceosome RNA helicase BAT1 isoform 3 (429 aa)
     
 
  0.975
GRMZM2G088218_P03
DEAD-box ATP-dependent RNA helicase 56 (446 aa)
     
 
  0.975
GRMZM2G404377_P01
MIF4G domain-containing protein / MA3 domain-containing protein (177 aa)
     
 
  0.967
100272538
Small nuclear ribonucleoprotein-associated protein (263 aa)
     
      0.963
100282140
Small nuclear ribonucleoprotein-associated protein (263 aa)
     
      0.963
100501177
DEAD-box ATP-dependent RNA helicase 32; Belongs to the DEAD box helicase family (746 aa)
     
   
  0.961
AC203535.4_FGP001
CDC5 protein (925 aa)
     
 
  0.960
GRMZM2G307567_P01
Uncharacterized protein (1364 aa)
     
 
  0.960
pco093291
Pre-mRNA-processing factor 19 homolog 2 (526 aa)
     
 
  0.958
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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