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GRMZM2G042398_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G042398_P01" - mRNA in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G042398_P01mRNA (367 aa)    
Predicted Functional Partners:
GRMZM2G171410_P05
Hypothetical protein LOC100193629 (420 aa)
     
 
0.837
pco130460
Hypothetical protein LOC100383378 (683 aa)
     
  0.805
GRMZM2G075737_P01
Annotation not available (315 aa)
     
  0.790
pco075430a
Hypothetical protein LOC100272776 (428 aa)
     
 
  0.744
GRMZM2G145879_P01
Hypothetical protein LOC100273893 (429 aa)
     
 
  0.744
DBP1
Hypothetical protein LOC100384116 (245 aa)
     
   
  0.722
GRMZM2G427031_P01
Hypothetical protein LOC100194099 ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (2163 aa)
     
    0.701
GRMZM2G468367_P01
Uncharacterized protein (492 aa)
     
    0.700
GRMZM2G388453_P02
Uncharacterized protein (617 aa)
     
    0.700
GRMZM2G126913_P02
Uncharacterized protein (762 aa)
     
    0.700
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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