STRINGSTRING
mop1 protein (Zea mays) - STRING interaction network
"mop1" - RNA-dependent RNA polymerase in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mop1RNA-dependent RNA polymerase (1127 aa)    
Predicted Functional Partners:
SGS3
Protein SUPPRESSOR OF GENE SILENCING 3 homolog (ZmSGS3)(Protein LEAFBLADELESS 1); Required for the biogenesis of miRNAs and trans-acting siRNAs and essential for the specification of adaxial/abaxial organ polarity. May be involved in natural virus resistance (By similarity) (594 aa)
     
 
  0.896
GRMZM2G413853_P01
Endoribonuclease Dicer homolog 3b-like (1517 aa)
     
 
  0.846
rmr6
DNA-directed RNA polymerase (EC 2.7.7.6); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1444 aa)
     
 
  0.769
RGD2
Ragged seedling 2 (1032 aa)
           
  0.768
Zm.37508
RNA polymerase IV second largest subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1229 aa)
     
   
  0.720
rmr1
Required to maintain repression 1 (1435 aa)
     
 
  0.677
GRMZM2G108166_P01
SNF2 domain-containing protein CLASSY 1 (1179 aa)
     
 
  0.677
ago104
Hypothetical protein LOC100383316 (910 aa)
     
   
  0.660
GRMZM5G814985_P01
Hypothetical protein LOC100279204 (595 aa)
     
 
  0.628
Zm.28028
Hypothetical protein LOC100192986 (707 aa)
     
 
  0.628
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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