STRINGSTRING
GRMZM2G044265_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G044265_P01" - Hypothetical protein LOC100193962 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G044265_P01Hypothetical protein LOC100193962 ; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex functio [...] (111 aa)    
Predicted Functional Partners:
GRMZM2G093325_P04
Hypothetical protein LOC100277865 (218 aa)
     
  0.972
Zm.30518
Ubiquitin carboxyl-terminal hydrolase 22 (563 aa)
       
  0.946
GRMZM2G429231_P02
Uncharacterized protein (2068 aa)
       
 
  0.898
Zm.121793
Uncharacterized protein (1397 aa)
       
 
  0.898
GRMZM2G322258_P01
Annotation not available (366 aa)
       
 
  0.898
GRMZM2G167900_P01
Annotation not available (281 aa)
       
 
  0.898
Zm.103963
Germinal-center associated nuclear protein (398 aa)
       
 
  0.898
GRMZM2G137395_P01
Uncharacterized protein (413 aa)
       
 
  0.898
GRMZM2G131389_P01
Uncharacterized LOC103633506 (1216 aa)
       
 
  0.898
GRMZM2G054133_P01
Uncharacterized protein (490 aa)
       
 
  0.898
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (17%) [HD]