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STRINGSTRING
pco063875 protein (Zea mays) - STRING interaction network
"pco063875" - PRPK in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco063875PRPK ; Belongs to the CGI121/TPRKB family (172 aa)    
Predicted Functional Partners:
GCP2
Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity (381 aa)
     
 
  0.990
GRMZM2G469812_P01
annotation not available (556 aa)
     
 
  0.974
GRMZM2G324727_P01
Uncharacterized protein (488 aa)
     
 
  0.974
GRMZM2G313649_P06
Protein kinase superfamily protein (281 aa)
     
 
  0.974
GRMZM2G420055_P01
O-sialoglycoprotein endopeptidase (217 aa)
     
 
  0.929
GRMZM2G130605_P01
Putative tRNA N6-adenosine threonylcarbamoyltransferase mitochondrial (211 aa)
     
 
  0.929
100383976
Protein POLLEN DEFECTIVE IN GUIDANCE 1 (600 aa)
           
  0.713
GRMZM2G094526_P01
Uncharacterized protein (317 aa)
           
  0.708
GRMZM2G055217_P01
DHBP synthase RibB-like alpha/beta domain (275 aa)
           
  0.708
GRMZM2G144868_P01
Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation (553 aa)
           
  0.604
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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