STRINGSTRING
LOB14 protein (Zea mays) - STRING interaction network
"LOB14" - Hypothetical protein LOC100193187 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOB14Hypothetical protein LOC100193187 (329 aa)    
Predicted Functional Partners:
GLK5
Hypothetical protein LOC100193306 (453 aa)
           
  0.721
Zm.33264
Putative uncharacterized protein (524 aa)
           
  0.528
GRMZM2G426964_P01
Hypothetical protein LOC100304292 (384 aa)
           
  0.525
gpm175
Hypothetical protein LOC100279290 ; Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis (598 aa)
           
  0.525
GRMZM2G179521_P01
Hypothetical protein LOC100383765 ; Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis (605 aa)
           
  0.522
Zm.67174
Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform ; Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis (507 aa)
           
  0.465
gpm742
Hypothetical protein LOC100383421 ; Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis (517 aa)
           
  0.465
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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