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GRMZM2G045070_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G045070_P01" - Topoisomerase-like protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G045070_P01Topoisomerase-like protein (665 aa)    
Predicted Functional Partners:
umc2770
GMP synthase [glutamine-hydrolyzing] (545 aa)
     
        0.912
eIF-4A
Eucaryotic initiation factor4; Belongs to the DEAD box helicase family (414 aa)
     
 
  0.891
LOC542317
Eukaryotic initiation factor 4A; ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5’-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon (By similarity) (414 aa)
     
 
  0.890
GRMZM6G711429_P01
annotation not available (286 aa)
     
 
  0.855
100281356
DEAD-box ATP-dependent RNA helicase 58 chloroplastic; ATP binding protein; Uncharacterized protein (374 aa)
     
 
  0.855
GRMZM2G167347_P01
annotation not available (504 aa)
     
 
  0.855
103627096
annotation not available (892 aa)
     
 
  0.855
AC198169.4_FGP004
DEAD-box ATP-dependent RNA helicase 47 mitochondrial; EMB1586; Uncharacterized protein (591 aa)
     
 
  0.855
GRMZM2G320497_P01
Elongation factor 1-gamma 2 (414 aa)
     
        0.831
100284862
Elongation factor 1-gamma 2 (414 aa)
     
        0.831
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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