STRINGSTRING
umc1254 protein (Zea mays) - STRING interaction network
"umc1254" - LOC100284297 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc1254LOC100284297 (308 aa)    
Predicted Functional Partners:
Zm.97303
Haloacid dehalogenase-like hydrolase domain-containing protein 1A (398 aa)
   
   
  0.721
GRMZM2G133608_P01
Annotation not available (57 aa)
       
      0.592
cl17080_1
Hypothetical protein LOC100193190 (401 aa)
       
      0.592
GRMZM2G084984_P01
Hypothetical protein LOC100273744 (271 aa)
         
  0.547
TIDP3737
Hypothetical protein LOC100272877 (458 aa)
     
   
  0.545
pco077559a
Hypothetical protein LOC100194104 (261 aa)
           
  0.545
pco061803
LOC100283872 (282 aa)
           
  0.545
IDP274
LOC100283746 (301 aa)
           
  0.545
PCO136133
LOC100284091 (264 aa)
           
  0.545
AC191575.2_FGP001
Hypothetical protein LOC100193647 (280 aa)
           
  0.545
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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