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STRINGSTRING
GRMZM2G045507_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G045507_P01" - SET domain-containing protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G045507_P01SET domain-containing protein (514 aa)    
Predicted Functional Partners:
100193676
Putative MATE efflux family protein; Transparent testa 12 protein ; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family (565 aa)
           
  0.596
GRMZM2G098744_P01
Putative MATE efflux family protein ; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family (692 aa)
           
  0.596
GRMZM2G011233_P01
Thioredoxin superfamily protein (237 aa)
     
   
  0.490
ARID6
annotation not available (453 aa)
           
  0.489
hb13
annotation not available (233 aa)
           
  0.455
103647776
annotation not available (224 aa)
           
  0.455
umc2204
Grassy tillers1 (239 aa)
           
  0.455
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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