STRINGSTRING
Zm.147243 protein (Zea mays) - STRING interaction network
"Zm.147243" - High-light-induced protein, chloroplastic-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.147243High-light-induced protein, chloroplastic-like (97 aa)    
Predicted Functional Partners:
GRMZM2G134130_P01
Photosystem II core complex proteins psbY (191 aa)
     
   
  0.776
GRMZM2G471304_P01
Uncharacterized protein (126 aa)
           
  0.721
GRMZM2G429955_P01
LHCII type I CAB-48; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated (311 aa)
           
  0.721
lbd14
Seed specific protein Bn15D17A (212 aa)
           
  0.721
LOB16
Seed specific protein Bn15D17A (313 aa)
           
  0.721
LOB7
LOB transcription factor (283 aa)
           
  0.721
lbd39
Putative LOB domain-containing family protein (212 aa)
           
  0.721
pco066337a
LOC100285714 (185 aa)
     
   
  0.628
GRMZM2G019807_P01
LOC100282478 (189 aa)
     
   
  0.628
Zm.92692
Photosystem II 22 kDa protein (272 aa)
     
   
  0.617
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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