STRINGSTRING
cl33241_1 protein (Zea mays) - STRING interaction network
"cl33241_1" - LOC100283323 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl33241_1LOC100283323 (285 aa)    
Predicted Functional Partners:
pco087232
Hypothetical protein LOC100193851 (1298 aa)
       
      0.868
GRMZM2G445888_P01
Annotation not available (276 aa)
       
      0.692
Zm.29665
exportin-T-like (965 aa)
       
      0.692
Zm.8598
exportin-T-like (852 aa)
       
      0.692
hag25
Hypothetical protein LOC100193024 (194 aa)
           
  0.548
Zm.98042
Retrotransposon protein (201 aa)
           
  0.545
HAT1
Histone acetyltransferase type B catalytic subunit (EC 2.3.1.48)(Histone acetyltransferase HAT B)(Histone acetyltransferase HAT-B-p50); Acetylates newly synthesized histones during DNA replication. Highly specific in vitro for the non-acetylated H4 which is acetylated sequentially at ’Lys-12’ and ’Lys-5’ into a di-acetylated form (468 aa)
           
  0.545
GRMZM2G173579_P04
Hypothetical protein LOC100192617 (408 aa)
           
  0.545
tds901.09
Hypothetical protein LOC100274305 (313 aa)
           
  0.545
EREB202
Ethylene response factor (423 aa)
           
  0.545
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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