STRINGSTRING
FIP1 protein (Zea mays) - STRING interaction network
"FIP1" - Putative uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIP1Putative uncharacterized protein (262 aa)    
Predicted Functional Partners:
GRMZM2G360677_P01
40S ribosomal protein S8 (221 aa)
           
  0.566
RPS8
40S ribosomal protein S8 (221 aa)
           
  0.566
Zm.10852
Branched-chain-amino-acid aminotransferase (405 aa)
           
  0.543
GRMZM2G057450_P01
Hypothetical protein LOC100192903 (539 aa)
           
  0.533
pco085368
LOC100283837 (140 aa)
           
  0.533
Zm.123019
LGC1 (LOC100281001), mRNA (145 aa)
           
  0.525
pco074093
Splicing factor U2AF 65 kDa subunit (594 aa)
           
  0.507
GRMZM2G022763_P03
Hypothetical protein LOC100272843 (590 aa)
           
  0.507
Zm.92231
Putative Pti1-like kinase (368 aa)
           
  0.468
Zm.6197
Hypothetical protein LOC100191947 ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (250 aa)
           
  0.467
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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