STRINGSTRING
yab4 protein (Zea mays) - STRING interaction network
"yab4" - Axial regulator YABBY2 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yab4Axial regulator YABBY2 (176 aa)    
Predicted Functional Partners:
cl35695_1
LOC100280926 (656 aa)
           
  0.489
GRMZM2G108159_P01
Annotation not available (336 aa)
           
  0.489
Zm.162725
Pantothenate kinase 2 (477 aa)
           
  0.489
GRMZM2G090332_P01
Transcriptional regulator SUPERMAN-like (194 aa)
     
   
  0.461
GRMZM2G086530_P01
Transcriptional regulator SUPERMAN-like (194 aa)
     
   
  0.461
GRMZM2G006282_P01
Transcriptional regulator SUPERMAN-like (174 aa)
     
   
  0.461
umc2615
Hypothetical protein LOC100279714 (986 aa)
           
  0.416
GRMZM2G431573_P01
Uncharacterized LOC103626409 (1026 aa)
           
  0.416
GRMZM2G410357_P01
Putative uncharacterized protein (991 aa)
           
  0.416
GRMZM2G340342_P01
Uncharacterized protein (708 aa)
           
  0.416
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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