STRINGSTRING
Zm.99842 protein (Zea mays) - STRING interaction network
"Zm.99842" - FIP1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.99842FIP1 (223 aa)    
Predicted Functional Partners:
GRMZM5G856297_P02
Hypothetical protein LOC100193383 (137 aa)
           
  0.530
GRMZM2G475536_P01
Hypothetical protein LOC100272638 (162 aa)
           
  0.530
GRMZM2G436295_P01
Uncharacterized protein (78 aa)
           
  0.530
umc2233
Hypothetical protein LOC100276732 (106 aa)
           
  0.530
Zm.28353
Uncharacterized protein (69 aa)
           
  0.530
GRMZM2G333183_P01
ABC transporter B family member 14-like (1240 aa)
           
  0.530
Zm.4199
Hypothetical protein LOC100278075 (97 aa)
           
  0.530
pco072542
LOC100284727 (334 aa)
           
  0.530
Zm.2669
Uncharacterized LOC103631870 (1018 aa)
           
  0.530
GLK44
DNA binding protein (338 aa)
           
  0.530
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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