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STRINGSTRING
GRMZM2G047178_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G047178_P01" - LYST-interacting protein 5-like protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G047178_P01LYST-interacting protein 5-like protein (559 aa)    
Predicted Functional Partners:
GRMZM2G126860_P01
Vacuolar sorting protein 4b ; Belongs to the AAA ATPase family (522 aa)
     
  0.989
GRMZM2G088834_P03
Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1; Belongs to the AAA ATPase family (435 aa)
     
  0.989
Sal1
Supernumerary aleurone1 ; Belongs to the SNF7 family (204 aa)
     
  0.985
GRMZM2G701024_P02
ESCRT-related protein CHMP1B (129 aa)
     
 
  0.929
GRMZM2G332102_P01
ESCRT-related protein CHMP1B (134 aa)
     
 
  0.929
100284928
Charged multivesicular body protein 5; Putative SNF domain containing family protein ; Belongs to the SNF7 family (228 aa)
     
 
  0.927
pco100749b
SNF7 family protein; Belongs to the SNF7 family (230 aa)
     
 
  0.927
100216894
Vacuolar protein sorting-associated protein 24 homolog 1; Belongs to the SNF7 family (229 aa)
     
 
  0.893
100273289
Vacuolar protein sorting-associated protein 24 homolog 1; Belongs to the SNF7 family (240 aa)
     
 
  0.893
GRMZM2G494600_P01
annotation not available (487 aa)
     
 
  0.875
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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