STRINGSTRING
pco136292 protein (Zea mays) - STRING interaction network
"pco136292" - LOC100282910 in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco136292LOC100282910 (148 aa)    
Predicted Functional Partners:
Zm.15058
LOC100285398 (290 aa)
   
        0.901
RCA1
Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic Precursor (RuBisCO activase)(RA); Activation of RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase; EC 4.1.1.39) involves the ATP-dependent carboxylation of the epsilon-amino group of lysine leading to a carbamate structure (433 aa)
   
        0.846
psb29
Photosystem II subunit29 (291 aa)
     
        0.825
GRMZM2G329047_P01
Photosystem I reaction center subunit V (145 aa)
     
        0.819
psa6
Photosystem I reaction center6 (134 aa)
     
        0.818
Zm.41417
Chlorophyll a/b-binding apoprotein CP24 precursor (248 aa)
     
        0.817
FDX1
Ferredoxin-1, chloroplastic Precursor (Ferredoxin I)(Fd I); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. Occupies a key position both for transferring the photoreducing power to Fd- NADP(+) oxidoreductase (FNR), hence the formation of NADPH, and for mediating the cyclic electron flow around photosystem I (PSI) (150 aa)
     
        0.814
Zm.28224
Photosystem I reaction center subunit II (236 aa)
     
        0.813
GRMZM2G074393_P01
Hypothetical protein LOC100273400 (LOC100273400), mRNA (193 aa)
     
        0.813
GRMZM2G056424_P01
Photosystem II 11 kD protein (170 aa)
   
        0.812
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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