STRINGSTRING
spds2 protein (Zea mays) - STRING interaction network
"spds2" - Spermidine synthase in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spds2Spermidine synthase (389 aa)    
Predicted Functional Partners:
GRMZM2G140824_P01
Hypothetical protein LOC100274319 (412 aa)
   
  0.982
cl4656_1
LOC100282130 (300 aa)
   
 
  0.981
SAMDC
S-adenosylmethionine decarboxylase proenzyme Precursor (AdoMetDC)(SAMDC)(EC 4.1.1.50) [Contains S-adenosylmethionine decarboxylase alpha chain;S-adenosylmethionine decarboxylase beta chain] (400 aa)
     
 
  0.974
IDP754
LOC100282888 (392 aa)
     
 
  0.969
Zm.82724
S-adenosylmethionine decarboxylase proenzyme (395 aa)
     
 
  0.969
GRMZM2G125635_P01
S-adenosylmethionine decarboxylase proenzyme (393 aa)
     
 
  0.969
pco077065
Hypothetical protein LOC100191603 (487 aa)
         
  0.938
PAO
Polyamine oxidase Precursor (EC 1.5.3.14)(EC 1.5.3.15); Catalyzes the oxidation of the secondary amino group of polyamines (spermine, spermidine and their acetyl derivatives). Plays an important role in the regulation of polyamine intracellular concentration (500 aa)
         
  0.935
acs7
1-aminocyclopropane-1-carboxylate synthase7 (486 aa)
       
  0.914
GRMZM2G035994_P01
Hypothetical protein LOC100383200 (504 aa)
         
  0.907
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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