STRINGSTRING
GRMZM2G048551_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G048551_P01" - RNA binding protein in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G048551_P01RNA binding protein (267 aa)    
Predicted Functional Partners:
pco114428
Hypothetical protein LOC100272607 (346 aa)
       
      0.733
GRMZM2G473389_P01
THO complex subunit 7B-like (272 aa)
       
      0.678
GRMZM2G116681_P02
Ngg1 interacting factor 3 like 1 binding protein 1 (LOC100283954), mRNA (315 aa)
       
      0.678
GRMZM2G163297_P01
ELAV-like protein 4 (129 aa)
   
 
    0.661
GRMZM2G077797_P01
RNA binding protein (166 aa)
   
 
    0.656
Zm.124522
Uncharacterized protein (909 aa)
       
      0.653
pco085368
LOC100283837 (140 aa)
   
 
    0.643
RAB15
Glycine-rich RNA-binding, abscisic acid-inducible protein ; Possibly has a role in RNA transcription or processing during stress (159 aa)
   
 
    0.640
TIDP3152
Hypothetical protein LOC100272627 (251 aa)
   
   
    0.640
GRP
Glycine-rich protein1 (155 aa)
   
 
    0.639
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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