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Zm.27623 protein (Zea mays) - STRING interaction network
"Zm.27623" - Isochorismatase family protein rutB in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.27623Isochorismatase family protein rutB (243 aa)    
Predicted Functional Partners:
Zm.142060
5-oxoprolinase (1256 aa)
   
 
    0.821
GRMZM2G049588_P01
Putative uncharacterized protein (732 aa)
   
   
  0.786
pco103153
Hypothetical protein LOC100274271 (569 aa)
   
 
  0.765
GRMZM2G391511_P01
Uncharacterized protein (416 aa)
   
 
  0.765
GRMZM2G177561_P01
Uncharacterized protein (223 aa)
   
 
  0.765
Zm.85488
Nicotinate phosphoribosyltransferase-like protein (568 aa)
   
 
  0.765
GRMZM5G824811_P01
Annotation not available (792 aa)
   
      0.620
GRMZM2G173195_P01
Hypothetical protein LOC100191807 (462 aa)
   
      0.620
GRMZM2G155348_P01
Hypothetical protein LOC100273469 (458 aa)
   
      0.620
GRMZM2G090747_P01
Hypothetical protein LOC100273065 (464 aa)
   
      0.620
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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