STRINGSTRING
rif1 protein (Zea mays) - STRING interaction network
"rif1" - R-interacting factor1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rif1R-interacting factor1 (452 aa)    
Predicted Functional Partners:
hb47
Uncharacterized protein (693 aa)
     
      0.628
Hox2b
Uncharacterized LOC542536 (1513 aa)
     
      0.628
hox3
Homeobox3 (1577 aa)
     
      0.628
Zm.82145
HOX1B protein (692 aa)
     
      0.628
hb28
Hypothetical protein LOC100275240 (721 aa)
     
      0.628
TAZ1
Hypothetical protein LOC100191305 (344 aa)
     
   
  0.596
Zm.102810
MYB94 (315 aa)
           
  0.569
wrky31
Uncharacterized protein (450 aa)
           
  0.569
WRKY9
Probable WRKY transcription factor 62 (345 aa)
           
  0.565
Zm.13413
R2R3MYB-domain protein Fragment (341 aa)
           
  0.530
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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