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STRINGSTRING
100304268 protein (Zea mays) - STRING interaction network
"100304268" - Ubiquitin carboxyl-terminal hydrolase in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100304268Ubiquitin carboxyl-terminal hydrolase ; Belongs to the peptidase C19 family (368 aa)    
Predicted Functional Partners:
GRMZM2G398124_P01
annotation not available (169 aa)
     
 
  0.982
103640814
Transducin/WD40 repeat-like superfamily protein (753 aa)
     
 
  0.972
GRMZM2G406643_P01
annotation not available (141 aa)
       
      0.774
103633261
Ubiquitin-60S ribosomal protein L40-1; Ubiquitin fusion protein; Uncharacterized protein (129 aa)
       
      0.774
AC233910.1_FGP003
UBiQuitin family member (143 aa)
       
      0.774
100282479
40S ribosomal protein S27a (156 aa)
       
 
  0.757
UBF9
Ubiquitin-40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked- Lys-48-linked is involve [...] (155 aa)
       
 
  0.757
GRMZM2G357296_P01
40S ribosomal protein S27a; Polyubiquitin-like protein (155 aa)
       
 
  0.757
pco110021
Polyubiquitin-like protein isoform 1; Polyubiquitin-like protein isoform 2 (155 aa)
       
 
  0.757
GRMZM2G006293_P01
40S ribosomal protein S27a (155 aa)
       
 
  0.757
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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