• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
pco142961 protein (Zea mays) - STRING interaction network
"pco142961" - Spindle and kinetochore-associated protein 1 homolog in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco142961Spindle and kinetochore-associated protein 1 homolog ; Belongs to the SKA1 family (211 aa)    
Predicted Functional Partners:
GRMZM5G866465_P01
annotation not available (359 aa)
     
 
  0.978
pco120628
HEC/Ndc80p family protein (523 aa)
     
 
  0.978
103633234
annotation not available (1223 aa)
     
   
  0.965
cl57132_1
ARM repeat superfamily protein (1048 aa)
     
   
  0.955
100193425
P-loop containing nucleoside triphosphate hydrolase superfamily protein; Thyroid receptor-interacting protein 13; Uncharacterized protein ; Belongs to the AAA ATPase family (484 aa)
     
   
  0.937
100383389
Protein TPX2 (751 aa)
     
   
  0.933
103647702
annotation not available (837 aa)
     
   
  0.933
GRMZM5G869482_P02
annotation not available (169 aa)
     
   
  0.929
GRMZM2G123920_P01
Nuf2 family protein expressed (457 aa)
     
   
  0.929
GRMZM5G869469_P01
Uncharacterized protein (192 aa)
     
   
  0.919
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (9%) [HD]