STRINGSTRING
Zm.4378 protein (Zea mays) - STRING interaction network
"Zm.4378" - AGP20 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.4378AGP20 (115 aa)    
Predicted Functional Partners:
Zm.130885
Probable glycerophosphoryl diester phosphodiesterase 2 (750 aa)
     
        0.608
Zm.141857
Probable receptor protein kinase TMK1 (962 aa)
     
        0.469
GRMZM2G387594_P01
Putative uncharacterized protein (64 aa)
     
        0.464
Zm.84126
LOC100283184 (430 aa)
     
        0.455
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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