STRINGSTRING
cl17031_1 protein (Zea mays) - STRING interaction network
"cl17031_1" - LOC100285053 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl17031_1LOC100285053 (296 aa)    
Predicted Functional Partners:
GRMZM2G155931_P01
60S ribosomal protein L32 Fragment (133 aa)
       
      0.892
GRMZM2G115901_P01
60S ribosomal protein L32 Fragment (133 aa)
       
      0.892
GRMZM2G065868_P04
Hypothetical protein LOC100280220 (134 aa)
       
      0.892
GRMZM2G047971_P01
Hypothetical protein LOC100193699 (134 aa)
       
      0.892
cl1797_4
60S ribosomal protein L32 Fragment (133 aa)
       
      0.892
GRMZM5G805526_P01
LOC100282946 (62 aa)
       
      0.827
pco068393
LOC100284182 (62 aa)
       
      0.827
Zm.92758
60S ribosomal protein L44 (105 aa)
       
      0.827
GRMZM2G125527_P01
60S ribosomal protein L44 (110 aa)
       
      0.827
GRMZM2G103059_P02
60S ribosomal protein L36a-like (459 aa)
       
      0.827
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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